This course is part of a full series of statistics classes, organized by Genotoul - Biostatistics at the INRA (Toulouse) since 2011. Its aim is to present advanced graphic usage in R with
ggplot2 and interactive graphic packages. The day is organized into 2 parts
The tutorial has been held on October 27th 2018 and October 12th 2019 at INRA Toulouse. The course is taught by Sébastien Déjean (IMT, Université Paul Sabatier) and myself. This page gathers information about it and material to download. You are asked to bring your own computer with installed software and packages. RStudio installation is recommended.
You will be asked to have your own R installation with a list of required packages already installed. We also advise that you install RStudio. The installation steps are described below. In case of difficulty, please, contact me (emails preferred).
sudo dpkg -i rstudio-1.0.143-amd64.deb sudo apt-get install -f
install.packages(c("ggplot2", "gridExtra", "RColorBrewer", "ggnetwork", "network", "tidyverse", "rgl", "iplots", "MASS", "plotly", "rbokeh"))
...is a package name. Some of these packages (especially
rbokeh) might require additional software or librairies, such as Java. Do not hesitate to contact me in case of problem during the installation. Please describe precisely the error message (screenshot is a plus) when reporting a problem.
Please make sure you have downloaded all material before the class.